Guanine-rich repeat sequences are known to adopt diverse G-quadruplex (G4) topologies. Determining the unfolding rates of individual G4 species is challenging due to the coexistence of multiple G4 conformations in a solution. Here, using single-molecule magnetic tweezers, we systematically measured the unfolding force distributions of 4 oncogene promoter G4s, 12 model sequences with two 1-nucleotide (nt) thymine loops that predominantly adopt parallel-stranded G4 structures, and 6 sequences forming multiple G4 structures. All parallel-stranded G4s reveal an unfolding force peak at 40-60 pN, which is associated with extremely slow unfolding rates on the order of 10-5-10-7 s-1. In contrast, nonparallel G4s and partially folded intermediate states reveal an unfolding force peak less then 40 pN. These results suggest a strong correlation between the parallel-stranded G4s folding topology and the slow unfolding rates and provide important insights into the mechanism that govern the stability and the transition kinetics of G4s.The NO-NO2 cycle determines the formation of O3 and hence plays a critical role in the oxidizing capacity of troposphere. Traditional view concluded that the heterogeneous oxidation of NO to NO2 was negligible due to the weak reactivity of NO on aerosols, compared to the homogeneous oxidation process. However, the results here reported for the first time that SO2 can greatly promote the heterogeneous transformation of NO into NO2 and HONO on MgO particles under ambient conditions. The uptake coefficients of NO were increased by 2-3 orders of magnitudes on SO2-aged MgO, compared to the fresh sample. Based on spectroscopic characterization and density functional theory (DFT) calculations, the active sites for the adsorption and oxidation of NO were determined to be sulfates, where an intermediate [SO4-NO] complex was formed during the adsorption. The decomposition of this species led to the formation of NO2 and the change of sulfate configuration. The formed NO2 could further react with surface sulfite to form HONO and sulfate. The conversion of NO to NO2 and HONO on the SO2-aged MgO surface under ambient conditions contributes a new formation pathway of NO2 and HONO and could be quite helpful for understanding the source of atmospheric oxidizing capacity as well as the formation of air pollution complexes in polluted regions such as the northern China.Difunctionalization reactions of C-C σ-bonds have the potential to streamline access to molecules that would otherwise be difficult to prepare. However, the development of such reactions is challenging because C-C σ-bonds are typically unreactive. Exploiting the high ring-strain energy of polycyclic carbocycles is a common strategy to weaken and facilitate the reaction of C-C σ-bonds, but there are limited examples of highly strained C-C σ-bonds being used in difunctionalization reactions. https://www.selleckchem.com/products/semaxanib-su5416.html We demonstrate that highly strained bicyclo[1.1.0]butyl boronate complexes (strain energy ca. 65 kcal/mol), which were prepared by reacting boronic esters with bicyclo[1.1.0]butyl lithium, react with electrophiles to achieve the diastereoselective difunctionalization of the strained central C-C σ-bond of the bicyclo[1.1.0]butyl unit. The reaction shows broad substrate scope, with a range of different electrophiles and boronic esters being successfully employed to form a diverse set of 1,1,3-trisubstituted cyclobutanes (>50 examples) with high diastereoselectivity. The high diastereoselectivity observed has been rationalized based on a combination of experimental data and DFT calculations, which suggests that separate concerted and stepwise reaction mechanisms are operating, depending upon the migrating substituent and electrophile used.The activation and coupling reactions of methane and acetylene mediated by M+ (M = Os, Ir, Pt, and Au) have been comparatively studied at room temperature by the techniques of mass spectrometry in conjunction with theoretical calculations. Studies have shown that Os+ and Ir+ can mediate the activation/coupling reaction of CH4 and C2H2, while Pt+ and Au+ cannot, which could be explained by the number of empty valence orbitals in the metal atom. In addition, there are different competition channels for the reaction mediated by Os+ and Ir+ an expected dehydrogenation and an unexpected C/C exchange. We find that if the rare C/C exchange reaction takes place, there are symmetric carbon atoms in the reaction intermediate and the C/C exchange reaction is favored kinetically. The C/C exchange reaction must be considered, which will affect the yield of the products in the primary reaction. This study shows the molecular-level mechanisms which include the C/C exchange reaction in the activation and coupling reaction of organic compounds mediated by different metals.A new route to heterobimetallic lanthanide-coinage-metal complexes is disclosed. The selective insertion of organic substrates such as phenyl iso(thio)cyanate into the La-P bond of the primary phosphido complex (PN) 2 La(PHMes) (1) (with PN- = (N-(2-(diisopropylphosphanyl)-4-methylphenyl)-2,4,6-trimethylanilide) yields the phospha(thio)ureate complexes (PN) 2 La(OC(NPh)(PHMes)) (2) and (PN) 2 La(SC(NPh)(PHMes)) (3) with retention of the PH protons. Subsequent deprotonation of the phosphaureate complex 2 with potassium hexamethyldisilazide (KHMDS, K[N(SiMe3)2]) leads to the polymeric complex [K(PN) 2 La(OC(NPh)(PMes))] n (4). Complex 4 was found to be an excellent precursor for salt metathesis reactions with copper(I) and gold(I) chlorides supported by an N-heterocyclic carbene (NHC, 5 and 6) or a cyclic alkyl amino carbene (CAAC, 7 and 8). This resulted in the unprecedented formation of heterobimetallic lanthanum-coinage-metal complexes, containing the first example of a μ,κ2(O,N)κ1(P)-phosphaureate bridging ligand. For an alternative route to complex 8 a direct protonolysis protocol between a new basic gold(I) precursor, namely ( Me CAAC)Au(HMDS), and 2 was also investigated. The complexes have been characterized by multinuclear NMR spectroscopy, IR spectroscopy, and X-ray crystallography (except for 8).
Guanine-rich repeat sequences are known to adopt diverse G-quadruplex (G4) topologies. Determining the unfolding rates of individual G4 species is challenging due to the coexistence of multiple G4 conformations in a solution. Here, using single-molecule magnetic tweezers, we systematically measured the unfolding force distributions of 4 oncogene promoter G4s, 12 model sequences with two 1-nucleotide (nt) thymine loops that predominantly adopt parallel-stranded G4 structures, and 6 sequences forming multiple G4 structures. All parallel-stranded G4s reveal an unfolding force peak at 40-60 pN, which is associated with extremely slow unfolding rates on the order of 10-5-10-7 s-1. In contrast, nonparallel G4s and partially folded intermediate states reveal an unfolding force peak less then 40 pN. These results suggest a strong correlation between the parallel-stranded G4s folding topology and the slow unfolding rates and provide important insights into the mechanism that govern the stability and the transition kinetics of G4s.The NO-NO2 cycle determines the formation of O3 and hence plays a critical role in the oxidizing capacity of troposphere. Traditional view concluded that the heterogeneous oxidation of NO to NO2 was negligible due to the weak reactivity of NO on aerosols, compared to the homogeneous oxidation process. However, the results here reported for the first time that SO2 can greatly promote the heterogeneous transformation of NO into NO2 and HONO on MgO particles under ambient conditions. The uptake coefficients of NO were increased by 2-3 orders of magnitudes on SO2-aged MgO, compared to the fresh sample. Based on spectroscopic characterization and density functional theory (DFT) calculations, the active sites for the adsorption and oxidation of NO were determined to be sulfates, where an intermediate [SO4-NO] complex was formed during the adsorption. The decomposition of this species led to the formation of NO2 and the change of sulfate configuration. The formed NO2 could further react with surface sulfite to form HONO and sulfate. The conversion of NO to NO2 and HONO on the SO2-aged MgO surface under ambient conditions contributes a new formation pathway of NO2 and HONO and could be quite helpful for understanding the source of atmospheric oxidizing capacity as well as the formation of air pollution complexes in polluted regions such as the northern China.Difunctionalization reactions of C-C σ-bonds have the potential to streamline access to molecules that would otherwise be difficult to prepare. However, the development of such reactions is challenging because C-C σ-bonds are typically unreactive. Exploiting the high ring-strain energy of polycyclic carbocycles is a common strategy to weaken and facilitate the reaction of C-C σ-bonds, but there are limited examples of highly strained C-C σ-bonds being used in difunctionalization reactions. https://www.selleckchem.com/products/semaxanib-su5416.html We demonstrate that highly strained bicyclo[1.1.0]butyl boronate complexes (strain energy ca. 65 kcal/mol), which were prepared by reacting boronic esters with bicyclo[1.1.0]butyl lithium, react with electrophiles to achieve the diastereoselective difunctionalization of the strained central C-C σ-bond of the bicyclo[1.1.0]butyl unit. The reaction shows broad substrate scope, with a range of different electrophiles and boronic esters being successfully employed to form a diverse set of 1,1,3-trisubstituted cyclobutanes (>50 examples) with high diastereoselectivity. The high diastereoselectivity observed has been rationalized based on a combination of experimental data and DFT calculations, which suggests that separate concerted and stepwise reaction mechanisms are operating, depending upon the migrating substituent and electrophile used.The activation and coupling reactions of methane and acetylene mediated by M+ (M = Os, Ir, Pt, and Au) have been comparatively studied at room temperature by the techniques of mass spectrometry in conjunction with theoretical calculations. Studies have shown that Os+ and Ir+ can mediate the activation/coupling reaction of CH4 and C2H2, while Pt+ and Au+ cannot, which could be explained by the number of empty valence orbitals in the metal atom. In addition, there are different competition channels for the reaction mediated by Os+ and Ir+ an expected dehydrogenation and an unexpected C/C exchange. We find that if the rare C/C exchange reaction takes place, there are symmetric carbon atoms in the reaction intermediate and the C/C exchange reaction is favored kinetically. The C/C exchange reaction must be considered, which will affect the yield of the products in the primary reaction. This study shows the molecular-level mechanisms which include the C/C exchange reaction in the activation and coupling reaction of organic compounds mediated by different metals.A new route to heterobimetallic lanthanide-coinage-metal complexes is disclosed. The selective insertion of organic substrates such as phenyl iso(thio)cyanate into the La-P bond of the primary phosphido complex (PN) 2 La(PHMes) (1) (with PN- = (N-(2-(diisopropylphosphanyl)-4-methylphenyl)-2,4,6-trimethylanilide) yields the phospha(thio)ureate complexes (PN) 2 La(OC(NPh)(PHMes)) (2) and (PN) 2 La(SC(NPh)(PHMes)) (3) with retention of the PH protons. Subsequent deprotonation of the phosphaureate complex 2 with potassium hexamethyldisilazide (KHMDS, K[N(SiMe3)2]) leads to the polymeric complex [K(PN) 2 La(OC(NPh)(PMes))] n (4). Complex 4 was found to be an excellent precursor for salt metathesis reactions with copper(I) and gold(I) chlorides supported by an N-heterocyclic carbene (NHC, 5 and 6) or a cyclic alkyl amino carbene (CAAC, 7 and 8). This resulted in the unprecedented formation of heterobimetallic lanthanum-coinage-metal complexes, containing the first example of a μ,κ2(O,N)κ1(P)-phosphaureate bridging ligand. For an alternative route to complex 8 a direct protonolysis protocol between a new basic gold(I) precursor, namely ( Me CAAC)Au(HMDS), and 2 was also investigated. The complexes have been characterized by multinuclear NMR spectroscopy, IR spectroscopy, and X-ray crystallography (except for 8).
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